<?xml version="1.0" encoding="UTF-8"?><?xml-stylesheet type="text/xsl" href="static/style.xsl"?><OAI-PMH xmlns="http://www.openarchives.org/OAI/2.0/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/ http://www.openarchives.org/OAI/2.0/OAI-PMH.xsd"><responseDate>2026-09-19T22:16:12Z</responseDate><request verb="GetRecord" identifier="oai:wakespace.lib.wfu.edu:10339/57157" metadataPrefix="dim">https://wakespace.lib.wfu.edu/server/oai/request</request><GetRecord><record><header><identifier>oai:null:10339/57157</identifier><datestamp>2026-09-18T12:44:41Z</datestamp><setSpec>com_10339_14934</setSpec><setSpec>col_10339_38132</setSpec></header><metadata><dim:dim xmlns:dim="http://www.dspace.org/xmlns/dspace/dim" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:doc="http://www.lyncode.com/xoai" xsi:schemaLocation="http://www.dspace.org/xmlns/dspace/dim http://www.dspace.org/schema/dim.xsd">
   <dim:field mdschema="dc" element="contributor" qualifier="author" lang="en_US">Johnson, Steven Michael</dim:field>
   <dim:field mdschema="dc" element="date" qualifier="accessioned">2015-06-23T08:35:54Z</dim:field>
   <dim:field mdschema="dc" element="date" qualifier="available">2015-06-23T08:35:54Z</dim:field>
   <dim:field mdschema="dc" element="date" qualifier="issued" lang="en_US">2015</dim:field>
   <dim:field mdschema="dc" element="identifier" qualifier="uri">https://wakespace.lib.wfu.edu/handle/10339/57157</dim:field>
   <dim:field mdschema="dc" element="description" qualifier="abstract" lang="en_US">Post-translational modifications (PTMs) are an important step in the formation of a mature protein. While much is known about some PTMs such as Phosphorylation, there are other PTMs such as Cysteine S-sulfenylation that are currently being researched and analyzed. For this project, an algorithm, Bit-Motif, was developed to analyze modification sites of PTMs by discovering statistically significant motifs around these sites. These motifs were then used as features for a Support Vector Machine to build a prediction model for PTM sites, called Prediction Using Motifs for PTMs (PUMP).</dim:field>
   <dim:field mdschema="dc" element="language" qualifier="iso" lang="en_US">en</dim:field>
   <dim:field mdschema="dc" element="publisher" lang="en_US">Wake Forest University</dim:field>
   <dim:field mdschema="dc" element="subject" lang="en_US">Motif Search</dim:field>
   <dim:field mdschema="dc" element="subject" lang="en_US">Post-Translational Modification</dim:field>
   <dim:field mdschema="dc" element="subject" lang="en_US">Support Vector Machine</dim:field>
   <dim:field mdschema="dc" element="title" lang="en_US">Algorithms to Detect Motifs and Predict Post-Translational Modification Sites</dim:field>
   <dim:field mdschema="dc" element="type" lang="en_US">Thesis</dim:field>
   <dim:field mdschema="thesis" element="contributor" qualifier="committeeChair" lang="en_US">Turkett, William H</dim:field>
   <dim:field mdschema="thesis" element="contributor" qualifier="committeeMember" lang="en_US">Cho, Samuel</dim:field>
   <dim:field mdschema="thesis" element="contributor" qualifier="committeeMember" lang="en_US">Poole, Leslie</dim:field>
   <dim:field mdschema="thesis" element="degree" qualifier="discipline" lang="en_US">Computer Science</dim:field>
   <dim:field mdschema="others" element="access-status">open.access</dim:field>
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